|

Biomarkers in Inflammatory bowel disease with antibody therapy

Two types of inflammatory bowel disease, Ulcerative colitis and Crohn’s disease. A challenge in IBD development is that many drugs show systemic PK and PD but fail in the intestinal mucosa. Most companies focus on Ulcerative colitis due to a) homogenous biology, b) access to tissue, c) established endpoints and d) lower variability in translational biomarkers. The plan is a biopsy based structure showing antibody target engagement that normalizes inflammation in colon and complements molecular mucosal healing signature while matching or preceding clinical efficacy.
It rests on 4 pillars:


1. Tissue exposure:
◦ Question: Does antibody reach the mucosa, how much of it reaches target cells and how long is the exposure?
◦ Comments: Need Tissue PK, also look for ADA


2. Target engagement:
◦ Question: What is target/receptor occupancy for ligand suppression and downstream signaling.
◦ Comments: Receptor for occupancy (IL23R, TL1A), Pathway – (INFy, TNF, fibrosis)


3. Mucosal repair:
◦ Question: Epithelial regeneration, barrier restoration, tight junction recovery, goblet cell normalization?
◦ Comments: Need IHC spatial biology platform for biopsy through sigmoidoscopy. Measure genes for Barrier function (CLDN1/4), epithelial regeneration (KRT20, EPCAM). Add: Neutrophil reduction, T-cell activity, macrophages and cytokines


4. Responder analysis:
◦ Question: Who responds to treatment as measured by transcriptomics, spatial biology and Proteomics
◦ Comment: Will need these later in development. Key question: does the antibody accelerate repair of inflamed mucosa as compared to current therapies?


Execution through: Histology, Paired biopsies, IHC, Spatial proteomics, LC-MS analysis. For bi/tri-specific antibody need to measure multiple pathways. Add standard measures: Geboes score, Roberts Histopath index, Nancy index, Calprotectin, lactoferrin.

Similar Posts

  • Filtering bacteria

    Multi Drug resistance to bacteria is a problem since bacteria continue dividing in blood causing sepsis that cannot be controlled by antibiotics and ultimately causing death. There have been multiple methods that have been proposed. A unique method has been published in Nature that incorporates “filtering” blood to remove the bacteria.Blood flows very rapidly through…

  • Synthetic biology dyes

    A synthetic biology company called Huue is going forward to create dye’s from bacteria. The cool part is that they are taking machinery that is in plants and introducing them into bacteria.An advantage is that you could manipulate and then come up with new dyes. The dye Huue has started with is called Indigo and…

  • Open source goodies

    Open source text search engine There are many technologies available that get slightly better packaged and then sold commercially. Often times the technologies are so superb and crowd sourced so well that it is surprising that many people do not consider it as a valid strategy for their laboratories or companies. Take the example of…

  • Flu vaccine – FAST

    Translational Medicine had a paper by Dr Dormitzer from Novartis and Dr Venter of creating a flu vaccine in just about 4 days and 4 hours, as opposed to months and weeks that it used to take previously. They used the sequence supplied by Biomedical Advanced Research and Development Authority and transfecting it into tissue culture…